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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "seroreconstruct" in publications use:'
type: software
license: GPL-2.0-or-later
title: 'seroreconstruct: Reconstructing Antibody Dynamics to Estimate the Risk of
  Influenza Virus Infection'
version: 1.1.5
doi: 10.1038/s41467-022-29310-8
identifiers:
- type: doi
  value: 10.32614/CRAN.package.seroreconstruct
abstract: A Bayesian framework for inferring influenza infection status from serial
  antibody measurements. Jointly estimates season-specific infection probabilities,
  antibody boosting and waning after infection, and baseline hemagglutination inhibition
  (HAI) titer distributions via Markov chain Monte Carlo (MCMC). Supports multi-season
  analysis and subgroup comparisons via a group_by interface. See Tsang et al. (2022)
  <https://doi.org/10.1038/s41467-022-29310-8> for methodological details.
authors:
- family-names: Tsang
  given-names: Tim
  email: timkltsang@gmail.com
  orcid: https://orcid.org/0000-0001-5037-6776
preferred-citation:
  type: article
  title: Reconstructing antibody dynamics to estimate the risk of influenza virus
    infection
  authors:
  - family-names: Tsang
    given-names: Tim K.
  - family-names: Cowling
    given-names: Ben J.
  - family-names: Fang
    given-names: Vicky J.
  - family-names: Chan
    given-names: Kwok-Hung
  - family-names: Ip
    given-names: Dennis K. M.
  - family-names: Leung
    given-names: Gabriel M.
  - family-names: Peiris
    given-names: J. S. Malik
  - family-names: Cauchemez
    given-names: Simon
  journal: Nature Communications
  year: '2022'
  volume: '13'
  doi: 10.1038/s41467-022-29310-8
  start: '1557'
repository: https://timktsang.r-universe.dev
repository-code: https://github.com/timktsang/seroreconstruct
commit: 5bb6441eaa4450489fb61eb116899b5f455dd7b0
url: https://github.com/timktsang/seroreconstruct
date-released: '2026-03-30'
contact:
- family-names: Tsang
  given-names: Tim
  email: timkltsang@gmail.com
  orcid: https://orcid.org/0000-0001-5037-6776