Package: seroreconstruct
Type: Package
Title: Reconstructing Antibody Dynamics to Estimate the Risk of
        Influenza Virus Infection
Version: 1.1.5
Authors@R: 
    c(person(given = "Tim",
             family = "Tsang",
             role = c("aut", "cre"),
             email = "timkltsang@gmail.com",
             comment = c(ORCID = "0000-0001-5037-6776")))
Maintainer: Tim Tsang <timkltsang@gmail.com>
Description: A Bayesian framework for inferring influenza infection
        status from serial antibody measurements. Jointly estimates
        season-specific infection probabilities, antibody boosting and
        waning after infection, and baseline hemagglutination
        inhibition (HAI) titer distributions via Markov chain Monte
        Carlo (MCMC). Supports multi-season analysis and subgroup
        comparisons via a group_by interface. See Tsang et al. (2022)
        <doi:10.1038/s41467-022-29310-8> for methodological details.
License: GPL (>= 2)
Encoding: UTF-8
LazyData: TRUE
URL: https://github.com/timktsang/seroreconstruct
BugReports: https://github.com/timktsang/seroreconstruct/issues
Depends: R (>= 3.5.0)
Imports: Rcpp (>= 1.0.9), RcppParallel
LinkingTo: Rcpp, RcppArmadillo, RcppParallel
Suggests: testthat (>= 3.0.0), knitr, rmarkdown
Config/testthat/edition: 3
VignetteBuilder: knitr
SystemRequirements: TBB
RoxygenNote: 7.3.3
Config/pak/sysreqs: cmake
Repository: https://timktsang.r-universe.dev
Date/Publication: 2026-03-30 14:58:43 UTC
RemoteUrl: https://github.com/timktsang/seroreconstruct
RemoteRef: HEAD
RemoteSha: 5bb6441eaa4450489fb61eb116899b5f455dd7b0
NeedsCompilation: yes
Packaged: 2026-10-31 08:24:14 UTC; root
Author: Tim Tsang [aut, cre] (ORCID: <https://orcid.org/0000-0001-5037-6776>)